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Utils SpansCut to SegmentsCut, IntegerSegment and IntegerSegmentSet (#756)

pull/1/head
Coin de Gamma 5 years ago committed by rozetko
parent
commit
b6d80015b6
  1. 205
      server/spec/utils/segments.jest.ts
  2. 51
      server/spec/utils/spans.jest.ts
  3. 4
      server/src/controllers/analytics_controller.ts
  4. 185
      server/src/utils/segments.ts
  5. 64
      server/src/utils/spans.ts

205
server/spec/utils/segments.jest.ts

@ -0,0 +1,205 @@
import { cutSegmentWithSegments, IntegerSegment, IntegerSegmentsSet } from '../../src/utils/segments';
import 'jest';
function IS(from: number, to: number) {
return new IntegerSegment(from, to);
}
function ISS(xs: [number, number][]) {
return new IntegerSegmentsSet(xs.map(x => IS(x[0], x[1])));
}
function cutSpan(from: number, to: number, cuts: [number, number][]): [number, number][] {
return cutSegmentWithSegments(
new IntegerSegment(from, to),
cuts.map(([from, to]) => new IntegerSegment(from, to))
).map(({ from, to }) => [from, to] as [number, number]);
}
describe('IntegerSegment', function() {
it('should throw an error on float from or to', function() {
expect(() => IS(0.1, 0)).toThrow();
expect(() => IS(1, 5.04)).toThrow();
expect(() => IS(1, 5)).not.toThrow();
});
});
describe('IntegerSegment.intersect', function() {
it('return undefined if segments don`t intersect', function() {
expect(IS(4, 5).insersect(IS(6, 10))).toEqual(undefined);
expect(IS(7, 10).insersect(IS(1, 3))).toEqual(undefined);
});
it('return a point when borders intersect', function() {
expect(IS(4, 5).insersect(IS(5, 6))).toEqual(IS(5, 5));
expect(IS(4, 5).insersect(IS(4, 4))).toEqual(IS(4, 4));
});
});
describe('IntegerSegmentSet constructor', function() {
it('can construct from empty segments list', function() {
expect(() => ISS([])).not.toThrow();
});
it('should sort segments', function() {
expect(ISS([[10, 15], [5, 8]]).segments).toEqual([IS(5, 8), IS(10, 15)]);
expect(ISS([[10, 15], [-Infinity, 8]]).segments).toEqual([IS(-Infinity, 8), IS(10, 15)]);
expect(ISS([[10, Infinity], [-Infinity, 8]]).segments).toEqual([IS(-Infinity, 8), IS(10, Infinity)]);
});
it('should merge segments', function() {
expect(ISS([[5, 10], [7, 20]]).segments).toEqual([IS(5, 20)]); // it's because 7 <= 10
expect(ISS([[5, 10], [10, 20]]).segments).toEqual([IS(5, 20)]);
expect(ISS([[5, 10], [11, 20]]).segments).toEqual([IS(5, 20)]); // it's because [..., 10], [11, ...],
// there is nothing between 10 and 11
expect(ISS([[3, 11], [4, 10]]).segments).toEqual([IS(3, 11)]);
});
});
describe('IntegerSegmentSet.inversed', function() {
it('should return Infinite segment whes set is empty', function() {
let setA = ISS([]);
expect(setA.inversed()).toEqual(ISS([[-Infinity, Infinity]]));
});
it('should return empty segment whes set is infinite', function() {
let setA = ISS([[-Infinity, Infinity]]);
expect(setA.inversed()).toEqual(ISS([]));
});
it('should inverse a point', function() {
expect(ISS([[4, 4]]).inversed()).toEqual(ISS([[-Infinity, 3], [5, Infinity]]));
});
it('should inverse basic cases', function() {
expect(ISS([[3, 10]]).inversed()).toEqual(ISS([[-Infinity, 2], [11, Infinity]]));
expect(ISS([[3, 10], [15, 20]]).inversed()).toEqual(ISS([[-Infinity, 2], [11, 14] , [21, Infinity]]));
});
it('should inverse infinites', function() {
expect(ISS([[3, Infinity]]).inversed()).toEqual(ISS([[-Infinity, 2]]));
expect(ISS([[-Infinity, 3]]).inversed()).toEqual(ISS([[4, Infinity]]));
});
});
describe('IntegerSegmentSet.intersected', function() {
it('should return empty set if one of intersection is empty', function() {
let setA = ISS([]);
let setB = ISS([[1, 5]]);
expect(setA.intersect(setB).segments).toEqual([]);
expect(setB.intersect(setA).segments).toEqual([]);
});
it('should intersect two segments', function() {
let setA = ISS([[2, 5]]);
let setB = ISS([[1, 4]]);
expect(setA.intersect(setB)).toEqual(ISS([[2, 4]]));
});
it('should intersect basic cases', function() {
let setA = ISS([[2, 5], [6, 10]]);
let setB = ISS([[1, 9]]);
let setC = ISS([[2, 5], [6, 10]]);
let setD = ISS([[4, 4], [10, 10]]);
let setE = ISS([[4, 4], [10, 10], [12, 15]]);
expect(setA.intersect(setB)).toEqual(ISS([[2, 5], [6, 9]]));
expect(setA.intersect(setC)).toEqual(ISS([[2, 5], [6, 10]]));
expect(setA.intersect(setD)).toEqual(ISS([[4, 4], [10, 10]]));
expect(setA.intersect(setE)).toEqual(ISS([[4, 4], [10, 10]]));
expect(setE.intersect(setA)).toEqual(ISS([[4, 4], [10, 10]]));
});
});
describe('cutSpanWithSpans', function() {
it('should handle empty input spans list case', function() {
expect(cutSpan(4, 10, [])).toEqual([[4, 10]]);
});
it('should handle works fine one point results', function() {
expect(cutSpan(1, 10, [[2, 10]])).toEqual([[1, 1]]);
expect(cutSpan(1, 10, [[2, 11]])).toEqual([[1, 1]]);
expect(cutSpan(1, 10, [[1, 9]])).toEqual([[10, 10]]);
expect(cutSpan(1, 10, [[0, 9]])).toEqual([[10, 10]]);
expect(cutSpan(1, 10, [[1, 4], [6, 10]])).toEqual([[5, 5]]);
expect(cutSpan(1, 10, [[2, 9]])).toEqual([[1, 1], [10, 10]]);
});
it('should throw error is cut contains float border', function() {
expect(() => cutSpan(0, 10, [[0.1, 5]])).toThrow()
expect(() => cutSpan(1, 10, [[0.9, 0.0]])).toThrow();
expect(() => cutSpan(0.5, 10, [[1, 5]])).toThrow();
});
it('should handle one-point cuts', function() {
expect(cutSpan(1, 10, [[5, 5]])).toEqual([[1, 4], [6, 10]]);
expect(cutSpan(1, 10, [[1, 1]])).toEqual([[2, 10]]);
expect(cutSpan(1, 10, [[10, 10]])).toEqual([[1, 9]]);
expect(cutSpan(1, 10, [[11, 11]])).toEqual([[1, 10]]);
expect(cutSpan(1, 15, [[11, 11], [12, 12]])).toEqual([[1, 10], [13, 15]]);
});
it('should handle basic cases', function() {
let cutSpans = [[3, 4], [6, 8], [11, 20]] as [number, number][];
expect(cutSpan(0, 11, cutSpans)).toEqual([[0, 2], [5, 5], [9, 10]]);
expect(cutSpan(5, 11, cutSpans)).toEqual([[5, 5], [9, 10]]);
expect(cutSpan(4, 10, cutSpans)).toEqual([[5, 5], [9, 10]]);
expect(cutSpan(5, 10, cutSpans)).toEqual([[5, 5], [9, 10]]);
expect(cutSpan(4, 20, cutSpans)).toEqual([[5, 5], [9, 10]]);
expect(cutSpan(4, 21, cutSpans)).toEqual([[5, 5], [9, 10], [21, 21]]);
expect(cutSpan(2, 20, cutSpans)).toEqual([[2, 2], [5, 5], [9, 10]]);
expect(cutSpan(2, 21, cutSpans)).toEqual([[2, 2], [5, 5], [9, 10], [21, 21]]);
expect(cutSpan(3, 11, cutSpans)).toEqual([[5, 5], [9, 10]]);
expect(cutSpan(3, 20, cutSpans)).toEqual([[5, 5], [9, 10]]);
expect(cutSpan(4, 7, [[3, 5], [6, 8]])).toEqual([]);
});
it('should handle infitie span and infinite cuts', function() {
expect(cutSpan(0, Infinity, [[5, 10]])).toEqual([[0, 4], [11, Infinity]]);
expect(cutSpan(0, 6, [[0, Infinity]])).toEqual([]);
expect(cutSpan(0, 6, [[2, Infinity]])).toEqual([[0, 1]]);
expect(cutSpan(-Infinity, Infinity, [[-Infinity, Infinity]])).toEqual([]);
});
it('should handle case when from and to are inside of one big span', function() {
expect(cutSpan(4, 10, [[1, 20]])).toEqual([]);
expect(cutSpan(4, 10, [[1, 10]])).toEqual([]);
expect(cutSpan(4, 10, [[4, 20]])).toEqual([]);
expect(cutSpan(4, 10, [[4, 10]])).toEqual([]);
});
it('should be ready to get not-sorted cuts', function() {
expect(cutSpan(0, 20, [[3, 5], [1, 2]])).toEqual([[0, 0], [6, 20]]);
expect(cutSpan(0, 20, [[3, 5], [1, 2], [0, 0]])).toEqual([[6, 20]]);
});
it('should be ready to get overlayed cuts', function() {
expect(cutSpan(0, 20, [[3, 5], [4, 10]])).toEqual([[0, 2], [11, 20]]);
expect(cutSpan(0, 20, [[3, 9], [4, 9]])).toEqual([[0, 2], [10, 20]]);
expect(cutSpan(0, 20, [[3, 11], [4, 10]])).toEqual([[0, 2], [12, 20]]);
expect(cutSpan(0, 20, [[3, 11], [3, 12]])).toEqual([[0, 2], [13, 20]]);
expect(cutSpan(0, 20, [[3, 11], [3, 12], [3, 10], [3, 15], [3, 14]])).toEqual([[0, 2], [16, 20]]);
expect(cutSpan(0, 20, [[2, 11], [3, 12]])).toEqual([[0, 1], [13, 20]]);
expect(cutSpan(0, 20, [[2, 15], [3, 12]])).toEqual([[0, 1], [16, 20]]);
expect(cutSpan(0, 20, [[2, 15], [3, 12], [1, 18]])).toEqual([[0, 0], [19, 20]]);
expect(cutSpan(0, 20, [[2, 15], [3, Infinity], [1, 18]])).toEqual([[0, 0]]);
expect(cutSpan(0, 20, [[3, 3], [3, Infinity]])).toEqual([[0, 2]]);
expect(cutSpan(0, 20, [[3, 3], [3, Infinity], [3, 3]])).toEqual([[0, 2]]);
expect(cutSpan(0, 20, [[3, 3], [3, Infinity], [3, 3], [4, 4]])).toEqual([[0, 2]]);
expect(cutSpan(0, 20, [[3, 3], [3, Infinity], [3, 3], [4, 4], [3, 5]])).toEqual([[0, 2]]);
expect(cutSpan(-Infinity, Infinity, [[3, 3], [3, Infinity], [3, 3], [4, 4], [3, 5]])).toEqual([[-Infinity, 2]]);
});
it('should handle cuts from point span', function() {
expect(cutSpan(1, 1, [[1, 1]])).toEqual([]);
expect(cutSpan(1, 1, [[0, 2]])).toEqual([]);
expect(cutSpan(1, 1, [[0, 1]])).toEqual([]);
expect(cutSpan(1, 1, [[1, 2]])).toEqual([]);
});
});

51
server/spec/utils/spans.jest.ts

@ -1,51 +0,0 @@
import { cutSpanWithSpans } from '../../src/utils/spans';
import 'jest';
function cutSpan(from: number, to: number, cuts: [number, number][]): [number, number][] {
return cutSpanWithSpans(
{ from: from, to: to },
cuts.map(([from, to]) => ({ from, to }))
).map(({ from, to }) => [from, to] as [number, number]);
}
describe('cutSpanWithSpans', function() {
it('should find spans in simple non-intersected borders', function() {
let cutSpans = [[3, 5], [6, 8], [10, 20]] as [number, number][];
expect(cutSpan(4, 11, cutSpans)).toEqual([[5, 6], [8, 10]]);
expect(cutSpan(5, 11, cutSpans)).toEqual([[5, 6], [8, 10]]);
expect(cutSpan(4, 10, cutSpans)).toEqual([[5, 6], [8, 10]]);
expect(cutSpan(5, 10, cutSpans)).toEqual([[5, 6], [8, 10]]);
expect(cutSpan(4, 20, cutSpans)).toEqual([[5, 6], [8, 10]]);
expect(cutSpan(4, 21, cutSpans)).toEqual([[5, 6], [8, 10], [20, 21]]);
expect(cutSpan(2, 20, cutSpans)).toEqual([[2, 3], [5, 6], [8, 10]]);
expect(cutSpan(2, 21, cutSpans)).toEqual([[2, 3], [5, 6], [8, 10], [20, 21]]);
expect(cutSpan(3, 11, cutSpans)).toEqual([[5, 6], [8, 10]]);
expect(cutSpan(3, 20, cutSpans)).toEqual([[5, 6], [8, 10]]);
expect(cutSpan(4, 7, [[3, 5], [6, 8]])).toEqual([[5, 6]]);
});
it('should handle empty input spans list case', function() {
expect(cutSpan(4, 10, [])).toEqual([[4, 10]]);
});
it('should handle case when from and to are inside of one big span', function() {
expect(cutSpan(4, 10, [[1, 20]])).toEqual([]);
expect(cutSpan(4, 10, [[1, 10]])).toEqual([]);
expect(cutSpan(4, 10, [[4, 20]])).toEqual([]);
expect(cutSpan(4, 10, [[4, 10]])).toEqual([]);
});
it('should be ready to get not-sorted cuts', function() {
expect(cutSpan(0, 20, [[3, 5], [1, 2]])).toEqual([[0, 1], [2, 3], [5, 20]]);
expect(cutSpan(0, 20, [[3, 5], [1, 2], [0.1, 0.5]])).toEqual([[0, 0.1], [0.5, 1], [2, 3], [5, 20]]);
});
it('should be ready to get overlayed cuts', function() {
expect(cutSpan(0, 20, [[3, 5], [4, 10]])).toEqual([[0,3], [10, 20]]);
});
});

4
server/src/controllers/analytics_controller.ts

@ -10,7 +10,7 @@ import { AlertService } from '../services/alert_service';
import { HASTIC_API_KEY } from '../config'; import { HASTIC_API_KEY } from '../config';
import { DataPuller } from '../services/data_puller'; import { DataPuller } from '../services/data_puller';
import { getGrafanaUrl } from '../utils/grafana'; import { getGrafanaUrl } from '../utils/grafana';
import { cutSpanWithSpans } from '../utils/spans'; import { cutSegmentWithSegments } from '../utils/segments';
import { queryByMetric, GrafanaUnavailable, DatasourceUnavailable } from 'grafana-datasource-kit'; import { queryByMetric, GrafanaUnavailable, DatasourceUnavailable } from 'grafana-datasource-kit';
@ -564,7 +564,7 @@ export async function getDetectionSpans(
} }
} }
let newDetectionSpans = cutSpanWithSpans({ from, to }, readySpans); let newDetectionSpans = cutSegmentWithSegments({ from, to }, readySpans);
if(newDetectionSpans.length === 0) { if(newDetectionSpans.length === 0) {
return [ new Detection.DetectionSpan(analyticUnitId, from, to, Detection.DetectionStatus.READY) ]; return [ new Detection.DetectionSpan(analyticUnitId, from, to, Detection.DetectionStatus.READY) ];
} }

185
server/src/utils/segments.ts

@ -0,0 +1,185 @@
//TODO: move this code to span model
import * as _ from 'lodash';
export declare type Segment = {
readonly from: number,
readonly to: number
}
export class IntegerSegment {
readonly from: number;
readonly to: number;
constructor(from: number, to: number) {
if(!(Number.isInteger(from) || !Number.isFinite(from))) {
throw new Error(`From should be an Integer or Infinity, but got ${from}`);
}
if(!(Number.isInteger(to) || !Number.isFinite(to))) {
throw new Error(`To should be an Integer or Infinity, but got ${from}`);
}
let l = IntegerSegment.lengthBetweenPoints(from, to);
if(l < 1) {
throw new Error(
`Length of segment is less than 1: [${from}, ${to}].
It's not possible for IntegerSegment`
);
}
this.from = from;
this.to = to;
}
get length(): number {
return IntegerSegment.lengthBetweenPoints(this.from, this.to);
}
insersect(segment: IntegerSegment): IntegerSegment | undefined {
let from = Math.max(this.from, segment.from);
let to = Math.min(this.to, segment.to);
if(IntegerSegment.lengthBetweenPoints(from, to) >= 1) {
return new IntegerSegment(from, to);
}
return undefined;
}
toString(): string {
return `[${this.from}, ${this.to}]`;
}
static lengthBetweenPoints(from: number, to: number): number {
let l = to - from + 1; // because [x, x] has length 1
if(isNaN(l)) { // when [Infinity, Infinity] or [-Infinity, -Infinity]
return 0;
} else {
return Math.max(l, 0); // becase [x, x - 1] we consider as zero length
}
}
}
export class IntegerSegmentsSet {
private _segments: IntegerSegment[];
constructor(segments: IntegerSegment[], noramlized: boolean = false) {
this._segments = segments;
if(noramlized !== true) {
this._normalize();
}
}
private _normalize() {
if(this._segments.length === 0) {
return;
}
let sortedSegments = _.sortBy(this._segments, s => s.from);
let lastFrom = sortedSegments[0].from;
let lastTo = sortedSegments[0].to;
let mergedSegments: IntegerSegment[] = [];
for(let i = 1; i < sortedSegments.length; i++) {
let currentSegment = sortedSegments[i];
if(lastTo + 1 >= currentSegment.from) { // because [a, x], [x + 1, b] is [a, b]
lastTo = Math.max(currentSegment.to, lastTo); // we can be inside previous
continue;
}
mergedSegments.push(new IntegerSegment(lastFrom, lastTo));
lastFrom = currentSegment.from;
lastTo = currentSegment.to;
}
mergedSegments.push(new IntegerSegment(lastFrom, lastTo));
this._segments = mergedSegments;
}
get segments(): IntegerSegment[] {
return this._segments;
}
inversed(): IntegerSegmentsSet {
var invertedSegments: IntegerSegment[] = [];
if(this._segments.length === 0) {
invertedSegments = [new IntegerSegment(-Infinity, Infinity)];
} else {
let push = (f: number, t: number) => {
if(IntegerSegment.lengthBetweenPoints(f, t) > 0) {
invertedSegments.push(new IntegerSegment(f, t));
}
}
_.reduce(this._segments, (prev: IntegerSegment | null, s: IntegerSegment) => {
if(prev === null) {
push(-Infinity, s.from - 1);
} else {
push(prev.to + 1, s.from - 1);
}
return s;
}, null);
push(_.last(this._segments).to + 1, Infinity);
}
return new IntegerSegmentsSet(invertedSegments, true);
}
intersect(other: IntegerSegmentsSet): IntegerSegmentsSet {
let result: IntegerSegment[] = [];
if(this._segments.length === 0 || other.segments.length === 0) {
return new IntegerSegmentsSet([], true);
}
let currentSegmentIndex = 0;
let withSegmentIndex = 0;
do {
let currentSegemet = this.segments[currentSegmentIndex];
let withSegment = other.segments[withSegmentIndex];
if(currentSegemet.to < withSegment.from) {
currentSegmentIndex++;
continue;
}
if(withSegment.to < currentSegemet.from) {
withSegmentIndex++;
continue;
}
let segmentsIntersection = currentSegemet.insersect(withSegment);
if(segmentsIntersection === undefined) {
throw new Error(
`Impossible condition, segments ${currentSegemet} and ${withSegment} don't interset`
)
}
result.push(segmentsIntersection);
if(currentSegemet.to < withSegment.to) {
currentSegmentIndex++;
} else {
withSegmentIndex++;
}
} while (
currentSegmentIndex < this._segments.length &&
withSegmentIndex < other.segments.length
)
return new IntegerSegmentsSet(result, true);
}
sub(other: IntegerSegmentsSet): IntegerSegmentsSet {
let inversed = other.inversed();
return this.intersect(inversed);
}
}
// TODO: move from utils and use generator
/**
*
* @param inputSegment a big segment which we will cut
* @param cutSegments segments to cut the inputSegment. Segments can overlay.
*
* @returns array of segments remain after cut
*/
export function cutSegmentWithSegments(inputSegment: Segment, cutSegments: Segment[]): Segment[] {
let setA = new IntegerSegmentsSet([new IntegerSegment(inputSegment.from, inputSegment.to)]);
let setB = new IntegerSegmentsSet(cutSegments.map(
s => new IntegerSegment(s.from, s.to)
));
let setResult = setA.sub(setB);
return setResult.segments.map(s => ({ from: s.from, to: s.to }));
}

64
server/src/utils/spans.ts

@ -1,64 +0,0 @@
//TODO: move this code to span model
import * as _ from 'lodash';
export declare type Span = {
from: number,
to: number
}
// TODO: move from utils and use generator
/**
*
* @param inputSpan a big span which we will cut
* @param cutSpans spans which to cut the inputSpan. Spans can overlay.
*
* @returns array of spans which are holes
*/
export function cutSpanWithSpans(inputSpan: Span, cutSpans: Span[]): Span[] {
if(cutSpans.length === 0) {
return [inputSpan];
}
// we sort and merge out cuts to normalize it
cutSpans = _.sortBy(cutSpans, s => s.from);
const mergedSortedCuts =_.reduce(cutSpans,
((acc: Span[], s: Span) => {
if(acc.length === 0) return [s];
let last = acc[acc.length - 1];
if(s.to <= last.to) return acc;
if(s.from <= last.to) {
last.to = s.to;
return acc;
}
acc.push(s);
return acc;
}), []
);
// this is what we get if we cut `mergedSortedCuts` from (-Infinity, Infinity)
const holes = mergedSortedCuts.map((cut, i) => {
let from = -Infinity;
let to = cutSpans[0].from;
if(i > 0) {
from = mergedSortedCuts[i - 1].to;
to = cut.from;
}
return { from, to };
}).concat({
from: mergedSortedCuts[mergedSortedCuts.length - 1].to,
to: Infinity
});
const holesInsideInputSpan = _(holes).map(c => {
if(c.to <= inputSpan.from) return undefined;
if(inputSpan.to <= c.from) return undefined;
return {
from: Math.max(c.from, inputSpan.from),
to: Math.min(c.to, inputSpan.to),
}
}).compact().value();
return Array.from(holesInsideInputSpan);
}
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